Coleoptera Phylogenomics HMM Bioinformatique Parsimony Reconciliation Tandem repeats Evolutionary trees K-mer Assembly Contracted de Bruijn graph Approximation Genome evolution Compatibility Pattern matching De Bruijn graph Next Generation Sequencers Minisatellite Algorithms Duplications Model Driven Engineering Genome Tool Indexing Tandem repeat Parameterized complexity DNA Evolution Genomics RNA Bayes Supertree Trees Gene tree Dynamic programming HIV-1 Sequencing Suffix tree Reads Species tree Consensus Overlap Distance method MRP Mixture models Efficiency Sequence analysis Stringology Indexation Double cut and join Automata DGE Construction algorithms Data structure Molecular clock SAGE Bioinformatics Molecular evolution Plasmodium falciparum MCMC Dynamic update Maximum likelihood Approximation algorithm Maximum independent set Tags Phylogenetics Human parasite Data structures Superstring Transcriptome Suffix array Comparative genomics Next Generation Sequencing Double cut and join DCJ Sequence alignment Alignment Gene fusion Algorithm Greedy ChIP-seq Data mining NGS Computational biology Index data structures Data compression Complexity Greedy conjecture Transcriptomics VNTR Deep sequencing Index Least-squares Phylogeny Software Distance methods Scalability Malaria Duplication Graph ALGORITHME