CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Research, vol.22, issue.22, pp.4673-4680, 1994. ,
DOI : 10.1093/nar/22.22.4673
A tool for multiple sequence alignment., Proc. Natl Acad. Sci. USA, pp.4412-4415, 1989. ,
DOI : 10.1073/pnas.86.12.4412
Profile hidden Markov models, Bioinformatics, vol.14, issue.9, pp.755-763, 1998. ,
DOI : 10.1093/bioinformatics/14.9.755
LAGAN and Multi-LAGAN: Efficient Tools for Large-Scale Multiple Alignment of Genomic DNA, Genome Research, vol.13, issue.4, pp.721-731, 2003. ,
DOI : 10.1101/gr.926603
MAVID: Constrained Ancestral Alignment of Multiple Sequences, Genome Research, vol.14, issue.4, pp.693-699, 2004. ,
DOI : 10.1101/gr.1960404
Phylogenetic inference, Molecular Systematics, pp.407-514, 1996. ,
MEGA2: molecular evolutionary genetics analysis software, Bioinformatics, vol.17, issue.12, pp.1244-1245, 2001. ,
DOI : 10.1093/bioinformatics/17.12.1244
URL : http://bioinformatics.oxfordjournals.org/cgi/content/short/17/12/1244
Improved tools for biological sequence comparison., Proc. Natl Acad. Sci. USA, pp.2444-2448, 1988. ,
DOI : 10.1073/pnas.85.8.2444
URL : https://www.ncbi.nlm.nih.gov/pmc/articles/PMC280013/pdf
A computer program for aligning a cDNA sequence with a genomic DNA sequence, Genome Res, vol.8, pp.967-974, 1998. ,