D. Tautz and C. Schlotterer, Simple sequences, Current Opinion in Genetics & Development, vol.4, issue.6, pp.832-837, 1994.
DOI : 10.1016/0959-437X(94)90067-1

A. Jeffreys, V. Wilson, and S. Thein, Hypervariable ???minisatellite??? regions in human DNA, Nature, vol.12, issue.6006, pp.67-73, 1985.
DOI : 10.1038/314067a0

A. Jeffreys, R. Neumann, and V. Wilson, Repeat unit sequence variation in minisatellites: A novel source of DNA polymorphism for studying variation and mutation by single molecule analysis, Cell, vol.60, issue.3, pp.473-485, 1990.
DOI : 10.1016/0092-8674(90)90598-9

P. Bois and A. Jeffreys, Minisatellite instability and germline mutation, Cellular and Molecular Life Sciences (CMLS), vol.55, issue.12, pp.1636-1648, 1999.
DOI : 10.1007/s000180050402

K. Tamaki and A. Jeffreys, Human tandem repeat sequences in forensic DNA typing, Legal Medicine, vol.7, issue.4, pp.244-250, 2005.
DOI : 10.1016/j.legalmed.2005.02.002

P. Bois, J. Stead, S. Bakshi, J. Williamson, R. Neumann et al., Isolation and Characterization of Mouse Minisatellites, Genomics, vol.50, issue.3, pp.317-330, 1998.
DOI : 10.1006/geno.1998.5329

P. Bois, G. Grant, and A. Jeffreys, Minisatellites Show Rare and Simple Intra-allelic Instability in the Mouse Germ Line, Genomics, vol.80, issue.1, pp.2-4, 2002.
DOI : 10.1006/geno.2002.6791

A. Jeffreys and R. Neumann, Somatic mutation processes at a human minisatellite, Human Molecular Genetics, vol.6, issue.1, pp.129-136, 1997.
DOI : 10.1093/hmg/6.1.129

S. Bérard and E. Rivals, Comparison of Minisatellites, Journal of Computational Biology, vol.10, issue.3-4, pp.357-372, 2003.
DOI : 10.1089/10665270360688066

J. Guénet and F. Bonhomme, Wild mice: an ever-increasing contribution to a popular mammalian model, Trends in Genetics, vol.19, issue.1, pp.19-31, 2003.
DOI : 10.1016/S0168-9525(02)00007-0

J. Auffray, F. Vanlerberghe, and J. Britton-davidian, The house mouse progression in Eurasia: a palaeontological and archaeozoological approach, Biological Journal of the Linnean Society, vol.41, issue.1-3, pp.13-25, 1990.
DOI : 10.1111/j.1095-8312.1990.tb00818.x

A. Orth, K. Belkhir, J. Britton-davidian, P. Boursot, T. Benazzou et al., Hybridation naturelle entre deux esp??ces sympatriques de souris Mus musculus domesticus L. et Mus spretus Lataste, Comptes Rendus Biologies, vol.325, issue.2, pp.89-97, 2002.
DOI : 10.1016/S1631-0691(02)01413-0

E. Prager, C. Orrego, and R. Sage, Genetic variation and phylogeography of central Asian and other house mice, including a major new mitochondrial lineage in Yemen, Genetics, vol.150, pp.835-861, 1998.

E. Prager, R. Sage, U. Gyllensten, W. Thomas, R. Hübner et al., Mitochondrial DNA sequence diversity and the colonization of Scandinavia by house mice from East Holstein, Biological Journal of the Linnean Society, vol.50, issue.2, pp.85-122, 1993.
DOI : 10.1111/j.1095-8312.1993.tb00920.x

P. Boursot, W. Din, R. Anand, D. Darviche, B. Dod et al., Origin and radiation of the house mouse: mitochondrial DNA phylogeny, Journal of Evolutionary Biology, vol.9, issue.4, pp.391-415, 1996.
DOI : 10.1046/j.1420-9101.1996.9040391.x

E. Bazin, S. Glemin, and N. Galtier, Population Size Does Not Influence Mitochondrial Genetic Diversity in Animals, Science, vol.312, issue.5773, pp.570-572, 2006.
DOI : 10.1126/science.1122033

URL : https://hal.archives-ouvertes.fr/halsde-00339540

W. Din, R. Anand, P. Boursot, D. Darviche, B. Dod et al., Origin and radiation of the house mouse: clues from nuclear genes, Journal of Evolutionary Biology, vol.9, issue.5, pp.519-539, 1996.
DOI : 10.1046/j.1420-9101.1996.9050519.x

T. Cucchi, J. Vigne, and J. Auffray, First occurrence of the house mouse (Mus musculus domesticus Schwarz & Schwarz, 1943) in the Western Mediterranean: a zooarchaeological revision of subfossil occurrences, Biological Journal of the Linnean Society, vol.84, issue.3, pp.429-445, 2005.
DOI : 10.1111/j.1095-8312.2005.00445.x

J. Baines and B. Harr, Reduced X-Linked Diversity in Derived Populations of House Mice, Genetics, vol.175, issue.4, pp.1911-1921, 2007.
DOI : 10.1534/genetics.106.069419

S. Boissinot and P. Boursot, Discordant phylogeographic patterns between the Y chromosome and mitochondrial DNA in the house mouse: selection on the Y chromosome?, Genetics, vol.146, pp.1019-1034, 1997.

B. Harr, Genomic islands of differentiation between house mouse subspecies, Genome Research, vol.16, issue.6, pp.730-737, 2006.
DOI : 10.1101/gr.5045006

P. Boursot and K. Belkhir, Mouse SNPs for evolutionary biology: Beware of ascertainment biases, Genome Research, vol.16, issue.10
DOI : 10.1101/gr.5541806

URL : https://hal.archives-ouvertes.fr/halsde-00300402

J. Zhang, K. Hunter, M. Gandolph, W. Rowe, R. Finney et al., A high-resolution multistrain haplotype analysis of laboratory mouse genome reveals three distinctive genetic variation patterns, Genome Research, vol.15, issue.2
DOI : 10.1101/gr.2901705

H. Orr and D. Presgraves, Speciation by postzygotic isolation: forces, genes and molecules, BioEssays, vol.97, issue.12, pp.1085-1094, 2000.
DOI : 10.1002/1521-1878(200012)22:12<1085::AID-BIES6>3.0.CO;2-G

A. Jeffreys, A. Macleod, K. Tamaki, D. Neil, and D. Monckton, Minisatellite repeat coding as a digital approach to DNA typing, Nature, vol.4, issue.6350, pp.204-209, 1991.
DOI : 10.1038/354204a0

R. Desper and O. Gascuel, Fast and accurate phylogeny reconstruction algorithms based on the minimum-evolution principle
URL : https://hal.archives-ouvertes.fr/lirmm-00269513

A. Guénoche, H. Garreta, O. Gascuel, M. Sagot, and . Berlin, Can We Have Confidence in a Tree Representation?, Proceedings of the First International Conference on Biology , Informatics, and Mathematics, pp.3-545, 2000.
DOI : 10.1007/3-540-45727-5_5