Phylogeny Reconstruction Methods

Olivier Gascuel 1, *
* Corresponding author
1 MAB - Méthodes et Algorithmes pour la Bioinformatique
LIRMM - Laboratoire d'Informatique de Robotique et de Microélectronique de Montpellier
Abstract : Probabilistic models of character change/substitutions; Distance (minimum evolution, NJ, Fitch-Margoliash, etc.) and Parsimony methods; Likelihood and Bayesian methods; Tree search; Sources of error, both systematic and non-systematic, and approaches to address them: Stochastic variation, Model mis-specification (base composition; substitution matrices; others), Long-branch attraction, Taxon-sampling; others
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Conference papers
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https://hal-lirmm.ccsd.cnrs.fr/lirmm-00511822
Contributor : Olivier Gascuel <>
Submitted on : Thursday, August 26, 2010 - 12:14:23 PM
Last modification on : Thursday, May 24, 2018 - 3:59:22 PM

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  • HAL Id : lirmm-00511822, version 1

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Olivier Gascuel. Phylogeny Reconstruction Methods. CoME: Course on Computational Molecular Evolution, May 2010, Hiraklion, Greece. ⟨lirmm-00511822⟩

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