Three-dimensional (3D) integration is considered to be a promising technology to tackle the global interconnect scaling problem for tera-scale integrated circuits (ICs). 3D ICs typically employ through-silicon-vias (TSVs) to connect planar circuits vertically. Due to its immature fabrication process, sev- eral defects such as void, misalignment and dust contamination, may be introduced. These defects can increase current densities within TSVs significantly and cause severe electromigration (EM) effect, which can degrade the reliability of 3D ICs considerably. In this paper, we propose a novel method to mitigate EM effect of the defective TSV. At first, we analyze various possible TSV defects and demonstrate that they can aggravate electromigration dramatically. Based on the observation that EM effect can be alleviated significantly by balancing the direction of current flow within TSV, we design an on-line self-healing circuit to protect defective TSVs, which can be detected during test procedure, from EM without degrading performance. Experimental results show that our proposed method can achieve tens times improve- ment on mean time to failure (MTTF) compared to the design without using such method with negligible hardware overheads and power consumption.