R. Agrawal and R. Srikant, Fast algorithms for mining association rules in large databases, International Conference on Very Large Data Bases (VLDB'94), pp.487-499, 1994.

R. Agrawal and R. Srikant, Mining sequential patterns, Proceedings of the Eleventh International Conference on Data Engineering, pp.3-14, 1995.
DOI : 10.1109/ICDE.1995.380415

W. Aigner, S. Miksch, H. Schumann, and C. Tominski, Visualization of Time-Oriented Data, 2011.
DOI : 10.1007/978-0-85729-079-3

N. Andrienko, G. Andrienko, and P. Gatalsky, Exploratory spatio-temporal visualization: an analytical review, Journal of Visual Languages & Computing, vol.14, issue.6, pp.503-541, 2003.
DOI : 10.1016/S1045-926X(03)00046-6

V. Archaimbault, P. Usseglio-polatera, J. Garric, J. Wasson, and M. Babut, Assessing pollution of toxic sediment in streams using bio-ecological traits of benthic macroinvertebrates, Freshwater Biology, vol.516, issue.423, pp.1430-1446, 2010.
DOI : 10.1111/j.1365-2427.2009.02281.x

V. Archaimbault, P. Usseglio-polatera, and J. Bossche, Functional Differences Among Benthic Macroinvertebrate Communities in Reference Streams of Same Order in a Given Biogeographic Area, Hydrobiologia, vol.139, issue.423, pp.171-182, 2005.
DOI : 10.1007/s10750-005-4459-9

D. Auber, C. Huet, A. Lambert, B. Renoust, A. Sallaberry et al., GosperMap: Using a Gosper Curve for Laying Out Hierarchical Data, IEEE Transactions on Visualization and Computer Graphics, vol.19, issue.11, pp.1820-1832, 2013.
DOI : 10.1109/TVCG.2013.91
URL : https://hal.archives-ouvertes.fr/hal-00959383

R. Axler, N. Will, E. Ruzycki, J. Henneck, J. Olker et al., Minnesota lake water quality on-line database and visualization tools for exploratory trend analyses, 2009.

S. T. Benedict, P. A. Conrads, T. D. Feaster, C. A. Journey, H. E. Golden et al., Data visualization , time-series analysis, and mass-balance modeling of hydrologic and water-quality data for the McTier Creek Watershed, 2012.

G. Billen, J. Garnier, J. Mouchel, and M. Silvestre, The Seine system: Introduction to a multidisciplinary approach of the functioning of a regional river system, Science of The Total Environment, vol.375, issue.1-3, pp.3751-3763, 2007.
DOI : 10.1016/j.scitotenv.2006.12.001

J. Boyer, P. Sterling, and R. Jones, Maximizing Information from a Water Quality Monitoring Network through Visualization Techniques, Estuarine, Coastal and Shelf Science, vol.50, issue.1
DOI : 10.1006/ecss.1999.0530

I. Brog and P. J. Groenen, Modern Multidimensional Scaling: Theory and Applications, Journal of Educational Measurement, vol.40, issue.3, 1997.
DOI : 10.1007/BF02289341

W. H. Brooke and J. V. Liebig, The Chemical Gatekeeper, 2002.

D. A. Bruns and T. O. Sweet, Geospatial tools to support watershed environmental monitoring and reclamation: Assessing mining impacts on the Upper Susquehanna-Lackawanna American heritage river, Advanced Integration of Geospatial Technologies in Mining and Reclamation, 2004.

H. Cheng, X. Yan, J. Han, and P. S. Yu, Direct Discriminative Pattern Mining for Effective Classification, 2008 IEEE 24th International Conference on Data Engineering, pp.169-178, 2008.
DOI : 10.1109/ICDE.2008.4497425

P. Compieta, S. D. Martinoc, M. Bertolottoa, F. Ferruccic, and T. Kechadi, Exploratory spatio-temporal data mining and visualization, Journal of Visual Languages & Computing, vol.18, issue.3, pp.255-279, 2007.
DOI : 10.1016/j.jvlc.2007.02.006

J. De-leeuw, Applications of convex analysis to multidimensional scaling, Recent Developments in Statistics, pp.133-145, 1977.

R. G. Death and M. K. Joy, Invertebrate community structure in streams of the Manawatu-Wanganui region, New Zealand: the roles of catchment versus reach scale influences, Freshwater Biology, vol.35, issue.8, pp.49982-997, 2004.
DOI : 10.1046/j.1365-2427.1997.00152.x

G. Dong and J. Li, Efficient mining of emerging patterns, Proceedings of the fifth ACM SIGKDD international conference on Knowledge discovery and data mining , KDD '99, pp.43-52, 1999.
DOI : 10.1145/312129.312191

J. Ellson, E. R. Gansner, E. Koutsofios, S. C. North, and G. Woodhull, Graphviz and Dynagraph ??? Static and Dynamic Graph Drawing Tools, Graph Drawing Software, pp.127-148, 2003.
DOI : 10.1007/978-3-642-18638-7_6

C. Ericson, Real-Time Collision Detection, 2005.

E. Environment and A. , CLC2006 technical guidelines, 2006.

E. Union, Directive 2000/60/ec of the European parliament and of the council of 23 october 2000 establishing a framework for community action in the field of water policy, Official Journal, OJ L, vol.327, pp.1-73, 2000.

E. Union, Council directive 98/83/ec of 3 november 1998 on the quality of water intended for human consumption, Official Journal , OJ L, vol.330, pp.1-32, 2009.

M. Fabrègue, A. Braud, S. Bringay, F. Ber, and M. Teisseire, OrderSpan: Mining Closed Partially Ordered Patterns, International Symposium on Intelligent Data Analysis (IDA'13), pp.186-197, 2013.
DOI : 10.1007/978-3-642-41398-8_17

A. B. Forgang, B. Hamann, and C. F. Cerco, Visualization of water quality data for the Chesapeake Bay, Proceedings of Seventh Annual IEEE Visualization '96, p.417, 1996.
DOI : 10.1109/VISUAL.1996.568146

L. Geng and H. J. Hamilton, Interestingness measures for data mining, ACM Computing Surveys, vol.38, issue.3, 2006.
DOI : 10.1145/1132960.1132963

P. L. Goethals, A. Dedecker, W. Gabriels, S. Lek, and N. Pauw, Applications of artificial neural networks predicting macroinvertebrates in freshwaters, Aquatic Ecology, vol.24, issue.4, pp.491-508, 2007.
DOI : 10.1007/s10452-007-9093-3
URL : https://hal.archives-ouvertes.fr/hal-00261335

R. L. Graham, An efficient algorith for determining the convex hull of a finite planar set, Information Processing Letters, vol.1, issue.4, pp.132-133, 1972.
DOI : 10.1016/0020-0190(72)90045-2

H. Guttinger and W. Stumm, Ecotoxicology<BR> An Analysis of the Rhine Pollution caused by the Sandoz Chemical Accident, 1986, Interdisciplinary Science Reviews, vol.95, issue.2, pp.127-136, 1986.
DOI : 10.1002/anie.198303801

D. Hering, R. K. Johnson, S. Kramn, S. Schmutz, K. Szoszkiewicz et al., Assessment of European streams with diatoms, macrophytes, macroinvertebrates and fish: a comparative metric-based analysis of organism response to stress, Freshwater Biology, vol.2, issue.9, pp.511757-1785, 2006.
DOI : 10.1046/j.1365-2427.2001.00690.x

S. S. Hye-won-lee and K. Bhang, Effective visualization for the spatiotemporal trend analysis of the water quality in the Nakdong river of Korea, Ecological Informatics, vol.5, issue.3, p.281292, 2010.

D. Keim, G. Andrienko, J. Fekete, C. Görg, J. Kohlhammer et al., Visual analytics: Definition, process, and challenges. In Information Visualization: Human-Centered Issues and Perspectives, LNCS, vol.4950, pp.154-175, 2008.
URL : https://hal.archives-ouvertes.fr/lirmm-00272779

D. Kocev, A. Naumoski, K. Mitreski, S. Krsti´ckrsti´c, and S. D?eroski, Learning habitat models for the diatom community in Lake Prespa, Ecological Modelling, vol.221, issue.2, pp.330-337, 2010.
DOI : 10.1016/j.ecolmodel.2009.09.002

N. Lalande, F. Cernesson, A. Decherf, and M. Tournoud, Implementing the DPSIR framework to link water quality of rivers to land use: methodological issues and preliminary field test, International Journal of River Basin Management, vol.23, issue.6, pp.1-17, 2014.
DOI : 10.1577/1548-8446(1997)022<0006:IOWLUO>2.0.CO;2

G. Lischeid, Non-linear visualization and analysis of large water quality data sets: a model-free basis for efficient monitoring and risk assessment, Stochastic Environmental Research and Risk Assessment, vol.3, issue.7, pp.977-990, 2009.
DOI : 10.1007/s00477-008-0266-y

M. H. Martin, The effects of temperature, river flow, and tidal cycles on the onset of glass eel and elver migration into fresh water in the American eel, Journal of Fish Biology, vol.47, issue.5, pp.891-902, 1995.
DOI : 10.1577/1548-8659(1986)115<258:ECOTFM>2.0.CO;2

M. Meybeck and R. Helmer, The quality of rivers: From pristine stage to global pollution, Global and Planetary Change, vol.1, issue.4, pp.283-309, 1989.
DOI : 10.1016/0921-8181(89)90007-6

C. Neal, M. Neal, L. Hill, and H. Wickham, The water quality of the River Thame in the Thames Basin of south/south-eastern England, Science of The Total Environment, vol.360, issue.1-3, pp.254-271, 2006.
DOI : 10.1016/j.scitotenv.2005.08.039

T. Ofenbock, O. Moog, J. Gerritsen, and M. Barbour, A stressor specific multimetric approach for monitoring running waters in Austria using benthic macro-invertebrates, Hydrobiologia, vol.516, pp.1-3251, 2004.

J. Pei, J. Han, B. Mortazavi-asl, J. Wang, H. Pinto et al., Mining sequential patterns by pattern-growth: The prefixspan approach, IEEE Transactions on Knowledge and Data Engineering, vol.16, pp.1424-1440, 2004.

N. B. Priyantha, H. Balakrishnan, E. D. Demaine, and S. J. Teller, Anchor-free distributed localization in sensor networks, International Conference on Embedded Networked Sensor Systems (Sen- Sys'03), pp.340-341, 2003.

F. Recknagel, I. Ostrovsky, H. Cao, T. Zohary, and X. Zhang, Ecological relationships, thresholds and time-lags determining phytoplankton community dynamics of Lake Kinneret, Israel elucidated by evolutionary computation and wavelets, Ecological Modelling, vol.255, pp.1-3, 2013.
DOI : 10.1016/j.ecolmodel.2013.02.006

H. Sakoe and S. Chiba, A dynamic programming approach to continuous speech recognition, International Congress on Acoustics, pp.65-69, 1971.

A. Sallaberry, N. Pecheur, S. Bringay, M. Roche, and M. Teisseire, Sequential patterns mining and gene sequence visualization to discover novelty from microarray data, Journal of Biomedical Informatics, vol.44, issue.5, pp.760-774, 2011.
DOI : 10.1016/j.jbi.2011.04.002
URL : https://hal.archives-ouvertes.fr/lirmm-00723587

J. Snow, On the Mode of Communication of Cholera, 1855.

K. Sugiyama, S. Tagawa, and M. Toda, Methods for Visual Understanding of Hierarchical System Structures, IEEE Transactions on Systems, Man, and Cybernetics, vol.11, issue.2, pp.109-125, 1981.
DOI : 10.1109/TSMC.1981.4308636

J. J. Thomas and K. A. Cook, Illuminating the Path, 2005.

M. Tournoud, S. Payraudeau, F. Cernesson, and C. Salles, Origins and quantification of nitrogen inputs into a coastal lagoon: Application to the Thau lagoon (France), Ecological Modelling, vol.193, issue.1-2, pp.19-33, 2006.
DOI : 10.1016/j.ecolmodel.2005.07.038

W. T. Tutte, How to Draw a Graph, Proceedings of the London Mathematical Society, pp.743-768, 1963.
DOI : 10.1112/plms/s3-13.1.743

U. Who, Water Quality Monitoring -A Practical Guide to the Design and Implementation of Freshwater Quality Studies and Monitoring Programmes, UNEP/WHO publications, 1996.

M. Wang, X. Shang, and Z. Li, Sequential Pattern Mining for Protein Function Prediction, Advanced Data Mining and Applications (ADMA'08), pp.652-658, 2008.
DOI : 10.1007/978-3-540-88192-6_68

M. Ward, G. Grinstein, and D. Keim, Interactive Data Visualization: Foundations, Techniques, and Applications, 2010.

W. Unep, Water Pollution Control -A Guide to the Use of Water Quality Management Principles. WHO publications, 1997.

P. C. Wong, W. Cowley, H. Foote, E. Jurrus, and J. Thomas, Visualizing sequential patterns for text mining, IEEE Symposium on Information Vizualization (InfoVis'00), pp.105-111, 2000.

X. Yan, J. Han, and R. Afshar, CloSpan: Mining: Closed Sequential Patterns in Large Datasets, SIAM International Conference on Data Mining (SDM'03), pp.166-177, 2003.
DOI : 10.1137/1.9781611972733.15

L. Yang, Visualizing Frequent Itemsets, Association Rules, and Sequential Patterns in Parallel Coordinates, Computational Science and Its Applications (ICCSA'03), volume 2667 of LNCS, pp.21-30
DOI : 10.1007/3-540-44839-X_3

Y. E. Yang, X. Cai, and E. E. Herricks, Identification of hydrologic indicators related to fish diversity and abundance: A data mining approach for fish community analysis, Water Resources Research, vol.43, issue.4, 2008.
DOI : 10.1029/2006WR005764