Two years later: the landscape of vocabularies and ontologies in the AgroPortal

Clement Jonquet 1, 2 Anne Toulet 1 Vincent Emonet 1
1 SMILE - Système Multi-agent, Interaction, Langage, Evolution
LIRMM - Laboratoire d'Informatique de Robotique et de Microélectronique de Montpellier
Abstract : Mid 2014, we started the AgroPortal project (http://agroportal.lirmm.fr) with the vision of offering a vocabulary & ontology repository for agronomy and related domains such as biodiversity, plant sciences and nutrition. The prototype found a good adoption, and growing interest appeared when presenting it to several interlocutors in the agronomy community (e.g., CGIAR (Bioversity International), INRA, IRD, CIRAD, IRSTEA, FAO, RDA, Planteome, EBI). We have now an advanced prototype platform which latest version (v1.3) was released in March 2017, that currently hosts 64 public ontologies including 38 not present in any such ontology repository (e.g., NCBO BioPortal) and 8 privates. This paper presents a short review of our current use cases and of the ontologies & vocabularies hosted in AgroPortal in Mai 2017. Thanks to a new ontology metadata model, we can now aggregate ontology descriptions to display information about the " landscape of agronomical ontologies " as presented.
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Workshop IN-OVIVE @ EFITA 2017, Jul 2017, Montpellier, France. 5th International Workshop on sources and data integration in agriculture, food and environment using ontologies, 2017, 〈https://workshop.inra.fr/in-ovive-2017/〉
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Clement Jonquet, Anne Toulet, Vincent Emonet. Two years later: the landscape of vocabularies and ontologies in the AgroPortal. Workshop IN-OVIVE @ EFITA 2017, Jul 2017, Montpellier, France. 5th International Workshop on sources and data integration in agriculture, food and environment using ontologies, 2017, 〈https://workshop.inra.fr/in-ovive-2017/〉. 〈lirmm-01598852〉

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