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A. Annane, Z. Bellahsene, F. Azouaou, and C. Jonquet, Selection and Combination of Heterogeneous BK to Enhance Biomedical Ontology Matching, 20th International Conference on Knowledge Engineering and Knowledge Management, 2016.

A. Annane, V. Emonet, C. Jonquet, F. Azouaou, and C. Jonquet, Multilingual Mapping Reconciliation between English-French Biomedical Ontologies, 6th International Conference on Web Intelligence, Mining and Semantics, WIMS'16, pp.13-15, 2016.
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C. Jonquet, A. Annane, K. Bouarech, V. Emonet, and S. Melzi, SIFR BioPortal : Un portail ouvert et générique d'ontologies et de terminologies biomédicales françaises au service de l'annotation sémantique, 16th Journées Francophones d'Informatique Médicale JFIM'16, 2016.

C. Jonquet, A. Annane, K. Bouarech, V. Emonet, and S. Melzi, SIFR BioPortal : Un portail ouvert et générique d'ontologies et de terminologies biomédicales françaises au service de l'annotation sémantique, 16th Journées Francophones d'Informatique Médicale, JFIM'16, 2016.

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C. Jonquet, P. Lependu, S. Falconer, A. Coulet, F. Natalya et al., NCBO Resource Index: Ontology-based search and mining of biomedical resources, 1st prize of Semantic Web Challenge at the 9th International Semantic Web Conference, ISWC'10, pp.316-324, 2011.
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C. Jonquet, H. Nigam, . Shah, A. Mark, and . Musen, The Open Biomedical Annotator, American Medical Informatics Association Symposium on Translational BioInformatics, AMIA-TBI'09, pp.56-60, 2009.
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C. Jonquet, A. Toulet, E. Arnaud, S. Aubin, E. Dzalé-yeumo et al., Reusing the NCBO BioPortal technology for agronomy to build AgroPortal, 7th International Conference on Biomedical Ontologies, ICBO'16, Demo Session, pp.4-6, 2016.
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C. Jonquet, A. Toulet, B. Dutta, and V. Emonet, Harnessing the power of unified metadata in an ontology repository: the case of AgroPortal, 2017.

R. Maulik, T. Kamdar, . Tudorache, A. Mark, and . Musen, A Systematic Analysis of Term Reuse and Term Overlap across Biomedical Ontologies, pp.853-871, 2017.

J. Lossio-ventura, C. Jonquet, M. Roche, M. Teisseire, J. Antonio et al., Biomedical term extraction: overview and a new methodology, Information Retrieval Journal, vol.14, issue.1, pp.59-99, 2015.
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J. Antonio-lossio-ventura, C. Jonquet, M. Roche, and M. Teisseire, A Way to Automatically Enrich Biomedical Ontologies, 19th International Conference on Extending Database Technology, EDBT'16, Poster Session, number 305, 2016.

J. Mccrae, D. Spohr, P. Antoniou, . Grobelnik, . Simperl et al., Linking Lexical Resources and Ontologies on the Semantic Web with Lemon, 8th Extended Semantic Web Conference, pp.245-259, 2011.
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C. Rueda, L. Bermudez, and J. Fredericks, The MMI Ontology Registry and Repository: A Portal for Marine Metadata Interoperability, MTS/IEEE Biloxi -Marine Technology for Our Future: Global and Local Challenges, OCEANS'09, p.6, 2009.

M. Sabou, V. Lopez, and E. Motta, Ontology Selection for the Real Semantic Web: How to Cover the Queen???s Birthday Dinner?, 15th International Conference on Knowledge Engineering and Knowledge Management Managing Knowledge in a World of Networks, EKAW'06, pp.96-111, 2006.
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A. Tchechmedjiev, A. Abdaoui, V. Emonet, and C. Jonquet, ICD10 Coding of Death Certificates with the NCBO and SIFR Annotator(s) at CLEF eHealth 2017 Task 1. In Working Notes of CLEF eHealth Evaluation Lab, p.16, 2017.

A. Tchechmedjiev, A. Abdaoui, V. Emonet, S. Melzi, J. Jonnagaddala et al., Enhanced Functionalities for Annotating and Indexing Clinical Text with the NCBO Annotator+, Bioinformatics, UNDER REVI. Under Review, 2017.

M. Till, O. Kutz, and M. Codescu, Ontohub: A semantic repository for heterogeneous ontologies, Theory Day in Computer Science, DACS'14, 2014.

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L. Patricia, N. Whetzel, and . Team, NCBO Technology: Powering semantically aware applications, Biomedical Semantics, issue.S8, pp.4-149, 2013.