dipwmsearch: a python package for searching di-PWM motifs - LIRMM - Laboratoire d’Informatique, de Robotique et de Microélectronique de Montpellier Access content directly
Software Year : 2021

dipwmsearch: a python package for searching di-PWM motifs

dipwmsearch : un paquetage python pour la recherche de motifs di-PWM

Abstract

This package provides efficient functions to search for one kind of probabilistic motifs known as di-nucleotidic Position Weight Matrices (di-PWMs) in a genomic sequence. The genomic sequence may contain positions with non-ATGC symbols, encoded with IUPAC.
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